Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGACGACTACATCGCCTGCTGCGT
.((((((.(((((((((((((&)))))..))))).....)))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256892
GeneSymbolSRI
Binding site479,508
Score0.846
Seed1
Au0.485
Energy-20.0
Binding len29
Me-6.107
Phylopstem3.1283317250000002
Phylopflank3.38521241875
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure