Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGGAGGCAGCAGCTGCAT
.(((((((((.(((....(((&)))......))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363595
GeneSymbolNR1H3
Binding site79,102
Score0.923
Seed1
Au0.353
Energy-21.3
Binding len23
Me-7.587
Phylopstem0.04704286666666667
Phylopflank0.8385854262500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure