Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCCAAAGCAGGGCTGCAAG
((((((((((....(((((((&)))))))....)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363595
GeneSymbolNR1H3
Binding site779,803
Score0.846
Seed1
Au0.515
Energy-19.9
Binding len24
Me-12.255
Phylopstem3.5235282500000005
Phylopflank2.32153698625
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure