Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGATTGACCACAGTTGCC
..(((((((.(((((...(((&)))...))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256909
GeneSymbolCYBRD1
Binding site3679,3699
Score0.923
Seed1
Au0.588
Energy-18.4
Binding len20
Me-6.433
Phylopstem0.40280188571428577
Phylopflank0.507963355
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure