Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATAGAAGGAGTAGTTGCAT
.(((((((((..((.((.(((&))).)).))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256909
GeneSymbolCYBRD1
Binding site2706,2728
Score0.885
Seed1
Au0.588
Energy-18.0
Binding len22
Me-10.7
Phylopstem0.27853478888888894
Phylopflank0.15072153899999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure