Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTGCTGTTTGCTGTG
..(((((.(((((...(((((&)))))..)))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256909
GeneSymbolCYBRD1
Binding site1887,1907
Score0.846
Seed0
Au0.588
Energy-17.2
Binding len20
Me-9.096
Phylopstem0.18813854000000002
Phylopflank-0.013070071250000006
Longest consecutive pairings5
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure