Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATGGCGGCGGCTGTGAC
((((((((((.(((((.(((.&))).))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256944
GeneSymbolCLCN4
Binding site1797,1818
Score0.981
Seed1
Au0.412
Energy-23.5
Binding len21
Me-6.762
Phylopstem4.282035496
Phylopflank5.4618904625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure