Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCGGGCGCGAT
((((..((((((((((.....&))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256944
GeneSymbolCLCN4
Binding site360,377
Score0.923
Seed0
Au0.265
Energy-22.1
Binding len17
Me-9.958
Phylopstem3.3499609999999995
Phylopflank1.34125948875
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure