Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGCTGCGGCGCAT
.(((.(((((((((...(((.&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256944
GeneSymbolCLCN4
Binding site2214,2232
Score0.846
Seed0
Au0.368
Energy-21.4
Binding len18
Me-8.881
Phylopstem3.7302783333333327
Phylopflank4.7711880749999995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure