Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGCGGACCTTGGCCATTGCCGCAGTCGCAGC
((((.((((((((..((((((&.))))))......)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256959
GeneSymbolCLCN6
Binding site5321,5356
Score0.846
Seed0
Au0.485
Energy-23.9
Binding len27
Me-9.649
Phylopstem-0.25544208749999997
Phylopflank0.29149348500000016
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure