Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCAAGAGCTGTGAG
(((((((((((((((......&))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257096
GeneSymbolPAX1
Binding site2685,2704
Score0.923
Seed1
Au0.456
Energy-20.6
Binding len19
Me-4.171
Phylopstem0.04489727777777777
Phylopflank0.010646222499999997
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end2
Position3UTR
2D Structure