Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTTGAATTCACCCGCTTCTGTTGCGTTGCGGACCGCGAGCTGCAC
.(((((((((((((((((.((&.)).))))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257134
GeneSymbolCOX14
Binding site177,225
Score0.846
Seed1
Au0.353
Energy-27.8
Binding len24
Me-3.793
Phylopstem0.06035942105263175
Phylopflank-0.20466067050000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure