Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCAGCA
.....((((((((((......&)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257139
GeneSymbolCLCNKA
Binding site4,15
Score1.0
Seed0
Au0.364
Energy-19.9
Binding len11
Me-13.899
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure