Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGAACTGTGGCTCCAGA
(((.((((((((((.(.((((&)))).).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257158
GeneSymbolCEP41
Binding site5617,5639
Score1.0
Seed0
Au0.441
Energy-20.3
Binding len22
Me-7.705
Phylopstem2.3118619
Phylopflank3.0061974937500002
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure