Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCTCTCAAGTAGCTGGGAC
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257160
GeneSymbolCEP41
Binding site1919,1945
Score0.846
Seed0
Au0.412
Energy-19.7
Binding len26
Me-5.728
Phylopstem-0.4205082955555556
Phylopflank0.16713375349999998
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure