Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCCTGCTGCTTGGCTGCAGT
(((((((((((((....(((.&)))....)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257180
GeneSymbolSLC20A2
Binding site8,31
Score0.897
Seed1
Au0.5
Energy-21.8
Binding len23
Me-5.763
Phylopstem4.557969533333333
Phylopflank2.0877446749999984
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure