Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAGTAGTTTGCAAACCAGCAGCTAGCAGT
(((((((((((((((((((.(&.).))))))).)).)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257181
GeneSymbolSLC20A2
Binding site145,179
Score0.846
Seed1
Au0.515
Energy-22.2
Binding len26
Me-3.938
Phylopstem0.44776459090909104
Phylopflank1.7547662437499991
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
Position5UTR
2D Structure