Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTTGGAAACTCTGCAGCCCCGGCTGCT
..(((((((.(((((((.(((&.))).))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257190
GeneSymbolPOM121
Binding site3239,3269
Score1.0
Seed1
Au0.426
Energy-25.3
Binding len21
Me-6.2
Phylopstem2.328126142857143
Phylopflank0.17870882749999994
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure