Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAACAACTGTAGCAAGAACTGCAC
.(((((((((((((((((((.&))))).))))))))))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257191
GeneSymbolDDX6
Binding site3956,3983
Score0.923
Seed1
Au0.588
Energy-23.1
Binding len27
Me-3.793
Phylopstem2.7900407730769237
Phylopflank3.25767752625
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure