Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACTGCAGTTCATCCGCAC
.((((((((((((((((....&))))))))))))).....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257191
GeneSymbolDDX6
Binding site2500,2522
Score0.846
Seed1
Au0.632
Energy-20.3
Binding len22
Me-3.793
Phylopstem2.865182142857143
Phylopflank3.9086397937500004
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure