Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAGGTGCTTGCCTGCAT
.((((((.(((.(((((((..&))))))).)))..)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257191
GeneSymbolDDX6
Binding site197,218
Score0.846
Seed1
Au0.559
Energy-20.0
Binding len21
Me-9.454
Phylopstem1.8591633428571428
Phylopflank2.4961086125
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
Position5UTR
2D Structure