Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCAACCTGAAAAGTATTGAGGAGCAGCTGGGAA
((.((((((((((((..((((&)))))))))................))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257191
GeneSymbolDDX6
Binding site1682,1718
Score0.846
Seed0
Au0.588
Energy-18.6
Binding len36
Me-5.728
Phylopstem1.2745372499999994
Phylopflank2.4126783712499993
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end6
PositionCDS
2D Structure