Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACAGTTTTACAAAATGTTTTCCTTTGTGTGCCT
....((((((((((((((((((&)))))))))....................))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001257197
GeneSymbolCUL3
Binding site6122,6161
Score0.846
Seed0
Au0.662
Energy-19.3
Binding len39
Me-9.547
Phylopstem3.7387654999999995
Phylopflank3.9599817762500003
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end8
Position3UTR
2D Structure