Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGATAGTTTTAATGAAATCTTCAATTCTTGCAGCTGTG
..(((((((((((((.(((((&.)))))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257198
GeneSymbolCUL3
Binding site3549,3591
Score0.846
Seed1
Au0.706
Energy-19.8
Binding len23
Me-5.19
Phylopstem2.6076122249999996
Phylopflank2.019781863375
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure