Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTTCCTCAGCTGCT
..(((((((.((..(..((((&)))))..)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257199
GeneSymbolGPD1
Binding site2024,2042
Score0.846
Seed1
Au0.441
Energy-20.0
Binding len18
Me-8.579
Phylopstem0.3151024714285714
Phylopflank-0.16715729875000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure