Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCATATATCTGTTCAATGACTATTAAGGTGCCTACTGTGTGCTAGGC
.(((((((((((..((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001257205
GeneSymbolFGF1
Binding site3203,3250
Score0.923
Seed1
Au0.515
Energy-21.5
Binding len17
Me-5.939
Phylopstem5.135255172727273
Phylopflank3.94305728625
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure