Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCTCCTGCAGCAGCCTGCCTGCAGCTGTC
..((((((((((((((.(((.&.)))...)))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257205
GeneSymbolFGF1
Binding site341,374
Score1.0
Seed1
Au0.426
Energy-23.0
Binding len27
Me-4.957
Phylopstem-0.023826715789473683
Phylopflank-0.10605040750000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure