Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCATATATCTGTTCAATGACTATTAAGGTGCCTACTGTGTGCTAGGC
.(((((((((((..((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001257208
GeneSymbolFGF1
Binding site2921,2968
Score1.0
Seed1
Au0.515
Energy-21.5
Binding len17
Me-5.939
Phylopstem0.8473890000000001
Phylopflank0.9215146424999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure