Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAAGCAGCAGCTGCT
..(((((((((.((((..(((&))))))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257209
GeneSymbolFGF1
Binding site215,234
Score0.846
Seed1
Au0.426
Energy-22.9
Binding len19
Me-8.304
Phylopstem-0.010162710000000023
Phylopflank0.11337831750000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure