Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTGCTGCGGTTGCC
..(((((((((((....(((.&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257320
GeneSymbolAPBB1
Binding site225,243
Score0.923
Seed1
Au0.279
Energy-21.7
Binding len18
Me-6.782
Phylopstem0.5184977909090911
Phylopflank0.8156663732500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure