Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCTGCAGCCTAGCTGGGC
.(.((((((.(((((((..((&))..))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257320
GeneSymbolAPBB1
Binding site249,269
Score0.846
Seed0
Au0.353
Energy-19.9
Binding len20
Me-6.593
Phylopstem0.8306457142857143
Phylopflank0.7015748365000001
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end6
Position5UTR
2D Structure