Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGCTACTGCAGCTGGAGG
((.((((((((((.((.((((&)))))).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257321
GeneSymbolAPBB1
Binding site865,886
Score0.846
Seed0
Au0.441
Energy-22.1
Binding len21
Me-6.352
Phylopstem4.056087799999999
Phylopflank2.6979223218749997
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure