Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGCTACTGCAGCTGGAGG
((.((((((((((.((.((((&)))))).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257325
GeneSymbolAPBB1
Binding site625,646
Score0.923
Seed0
Au0.441
Energy-22.1
Binding len21
Me-6.352
Phylopstem3.8411881
Phylopflank3.704258771125
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure