Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCTCCTGAGTAGCTGTGAT
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257334
GeneSymbolATP5F1A
Binding site4907,4933
Score0.846
Seed1
Au0.5
Energy-20.6
Binding len26
Me-4.171
Phylopstem6.28557319047619
Phylopflank6.159051556249999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure