Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGGCAACTGTGGGGGCAGCTGCGGC
((((((((((((((((.((((&)))).))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257357
GeneSymbolRAB44
Binding site606,634
Score0.846
Seed1
Au0.353
Energy-23.9
Binding len28
Me-3.938
Phylopstem2.673972095454545
Phylopflank1.712747615
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure