Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATTATCAATGGCCCCATAAAGTCATTCTGCTACCGCCGGCTGCAGT
(((((((((((((.(((....&.))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257361
GeneSymbolAMPD2
Binding site899,949
Score1.0
Seed1
Au0.456
Energy-23.5
Binding len20
Me-4.794
Phylopstem4.092969357142858
Phylopflank3.5636367927499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure