Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCAGCAGCTGCC
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363607
GeneSymbolPRPF40B
Binding site641,656
Score0.846
Seed1
Au0.412
Energy-22.7
Binding len15
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure