Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTGTGGCTGCTGCTGTGGA
(((((((.((((((((((((.&))))))...)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257407
GeneSymbolIL4R
Binding site2532,2556
Score0.846
Seed1
Au0.353
Energy-22.7
Binding len24
Me-6.251
Phylopstem1.4774386
Phylopflank0.28299421025000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure