Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCCCAGCTGTAGA
(((((((((.((..((((((.&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257408
GeneSymbolIKZF3
Binding site7871,7889
Score1.0
Seed1
Au0.515
Energy-22.5
Binding len18
Me-7.326
Phylopstem-0.019886888888888885
Phylopflank0.38459265
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure