Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAAGTGTTGGGGTTACAGGCGTGAGGCACCGCGGCTGG
...(((((((((.(((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257408
GeneSymbolIKZF3
Binding site8223,8268
Score0.846
Seed0
Au0.485
Energy-21.1
Binding len14
Me-7.804
Phylopstem4.674738888888889
Phylopflank4.668080499999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure