Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAAGTGTTGGGGTTACAGGCGTGAGGCACCGCGGCTGG
...(((((((((.(((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257410
GeneSymbolIKZF3
Binding site8064,8109
Score1.0
Seed0
Au0.485
Energy-21.1
Binding len14
Me-7.804
Phylopstem1.664996111111111
Phylopflank2.3416474000000007
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure