Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAAGTGTTGGGGTTACAGGCGTGAGGCACCGCGGCTGG
...(((((((((.(((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257411
GeneSymbolIKZF3
Binding site7896,7941
Score1.0
Seed0
Au0.485
Energy-21.1
Binding len14
Me-7.804
Phylopstem0.25372622222222224
Phylopflank0.23230518749999995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure