Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAAGTGTTGGGGTTACAGGCGTGAGGCACCGCGGCTGG
...(((((((((.(((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257413
GeneSymbolIKZF3
Binding site7662,7707
Score1.0
Seed0
Au0.485
Energy-21.1
Binding len14
Me-7.804
Phylopstem0.6923333333333335
Phylopflank0.20443268749999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure