Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAAAGTGTTGGGGTTACAGGCGTGAGGCACCGCGGCTGG
...(((((((((.(((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257414
GeneSymbolIKZF3
Binding site7923,7968
Score1.0
Seed0
Au0.485
Energy-21.1
Binding len14
Me-7.804
Phylopstem0.3545312222222222
Phylopflank0.09783852500000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure