Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTGCAGTTGTCTGTATGTGTTTTAACTATTACAGTGCATGTTAGGG
.((((((((((((((((((((.&)))))))).))))...........................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001257962
GeneSymbolPDLIM3
Binding site1308,1357
Score0.846
Seed1
Au0.676
Energy-17.3
Binding len49
Me-3.793
Phylopstem-0.2088413583333333
Phylopflank0.4465333637500001
Longest consecutive pairings8
Position of longest consecutive pairings41
Pairings in 3prime end7
Position3UTR
2D Structure