Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGCAACTGCAAACGTTACGTGAGGCCCTGAGGCAGCAGG
((((.(((((((((((..(((&)))..))))))))).....................)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257967
GeneSymbolITPRID1
Binding site2846,2889
Score0.846
Seed0
Au0.471
Energy-19.9
Binding len43
Me-8.057
Phylopstem1.0457927375
Phylopflank1.6711282356249997
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end6
PositionCDS
2D Structure