Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGGCACATTCACAGCCCCCAAGGCAGGTGCAGCTGCAGCTGCAGA
(((((((((((((((((....&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257976
GeneSymbolCIZ1
Binding site1253,1303
Score1.0
Seed1
Au0.426
Energy-30.0
Binding len19
Me-3.938
Phylopstem-0.148649
Phylopflank0.1611078875
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure