Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCATTTCTACAAATACATTGTCTTGCATTTAAAAATGCTAGGG
.((((((((((((((((.....&.)))))))).............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001257998
GeneSymbolVPS50
Binding site5358,5403
Score0.923
Seed1
Au0.662
Energy-18.6
Binding len31
Me-3.793
Phylopstem0.6804492068965519
Phylopflank0.43962961125
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end3
Position3UTR
2D Structure