Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTGAAACAACAGCAAGCTGCAGT
((((((((((.(((((.....&.))))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257998
GeneSymbolVPS50
Binding site405,429
Score0.923
Seed1
Au0.618
Energy-20.9
Binding len19
Me-6.762
Phylopstem4.420281554545454
Phylopflank4.363159487499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure