Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGACCTGTGCAAAGCAC
.(((.((.(((((((((((((&))))))))).)).))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001257998
GeneSymbolVPS50
Binding site1100,1124
Score0.846
Seed0
Au0.559
Energy-17.9
Binding len24
Me-10.226
Phylopstem4.9300841333333345
Phylopflank5.7712984687499995
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure